Checks to see if the universe is appropriate for the userSets Anything in the userSets should be present in the universe. In addition, 2 different regions in the userSets should not overlap the same region in the universe
checkUniverseAppropriateness(userSets, userUniverse, cores = 1, fast = FALSE)
userSets | Regions of interest |
---|---|
userUniverse | Regions tested for inclusion in userSets |
cores | Number of processors |
fast | Skip the (slow) test for many-to-many relationships |
No return value.
data("sample_input", package="LOLA") # load userSet data("sample_universe", package="LOLA") # load userUniverse checkUniverseAppropriateness(userSets, userUniverse)#>#>#>#>#>#> Warning: Your user sets contain ranges that are not in your universe. You need to expand your universe. OR: your universe contains overlapping regions. You should reduce it. OR: your universe contains regions that overlap multiple regions in your user sets, You should disjoin your universe.#>