View PEP config of the object of Project-class

Source: R/methods_Annotated.R

This method can be used to view the config slot of the Project-class or Annotated-class

# S4 method for Annotated
config(object)

Arguments

object

an object of Project-class

Value

a list with the config file

Examples

projectConfig = system.file('extdata', 'example_peps-master',
'example_BiocProject', 'project_config.yaml', package='BiocProject')
p=BiocProject(projectConfig)
#> Loading config file: /tmp/Rtmpp7Kvae/temp_libpath658d0e8e5/BiocProject/extdata/example_peps-master/example_BiocProject/project_config.yaml
#> Function 'readBedFiles' read from file '/tmp/Rtmpp7Kvae/temp_libpath658d0e8e5/BiocProject/extdata/example_peps-master/example_BiocProject/readBedFiles.R'
config(p)
#> Config object. Class: Config
#>  pep_version: 2.0.0
#>  sample_table: 
#> /tmp/Rtmpp7Kvae/temp_libpath658d0e8e5/BiocProject/extdata/example_peps-master/example_BiocProject/sample_table.csv
#>  bioconductor:
#>     readFunName: readBedFiles
#>     readFunPath: 
#> /tmp/Rtmpp7Kvae/temp_libpath658d0e8e5/BiocProject/extdata/example_peps-master/example_BiocProject/readBedFiles.R
#>  name: example_BiocProject