Read collection annotation

Read collection annotation

readCollectionAnnotation(dbLocation, collections = NULL)

Arguments

dbLocation	Location of the database
collections	Restrict the database loading to this list of collections. Leave NULL to load the entire database (Default).

Value

Collection annotation data.table

Examples

dbPath = system.file("extdata", "hg19", package="LOLA")
collectionAnno = readCollectionAnnotation(dbLocation=dbPath)
#> Reading collection annotations: 
#> 	ucsc_example: found collection annotation:/sfs/lustre/scratch/ns5bc/code/LOLA/inst/extdata/hg19/ucsc_example/collection.txt